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error in spike sequence for HK.3.1

#6Openjbloom 创建于 2023-09-10
bug
J
jbloomcommented
@corneliusroemer, I think you have some sort of error in the spike mutations listed for HK.3.1 in the [JSON file](https://github.com/corneliusroemer/pango-sequences/blob/main/data/pango-consensus-sequences_summary.json). The mutations listed in the JSON are as follows, and include no spike mutations after site 142. I think there should be spike mutations after site 142. ``` "aaSubstitutions": [ "E:T9I", "E:T11A", "M:Q19E", "M:A63T", "N:P13L", "N:R203K", "N:G204R", "N:S413R", "ORF1a:K47R", "ORF1a:S135R", "ORF1a:A690V", "ORF1a:T842I", "ORF1a:G1307S", "ORF1a:G1819S", "ORF1a:L3027F", "ORF1a:T3090I", "ORF1a:A3143V", "ORF1a:L3201F", "ORF1a:T3255I", "ORF1a:P3395H", "ORF1a:T4175I", "ORF1b:D54N", "ORF1b:P314L", "ORF1b:G662S", "ORF1b:S959P", "ORF1b:R1315C", "ORF1b:I1566V", "ORF1b:T2163I", "ORF3a:T223I", "ORF6:D61L", "ORF8:G8*", "ORF9b:I5T", "ORF9b:P10S", "S:T19I", "S:A27S", "S:Q52H", "S:V83A", "S:G142D" ], ```
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