ITADN

QC label for recombinant sequences

#1699Opennneune 创建于 2025-10-17
t:feat
N
nneunecommented
I would like to propose the addition of a QC label specifically for "recombinant" sequences (e.g., an "R" label). This feature should: - Assess the number of (private) mutations and reversions in a sequence. - Highlight and label the sequence as recombinant when the count exceeds a configurable threshold. This will help users quickly identify sequences that are likely recombinant and may require special attention in downstream analyses. **Details:** - The threshold for labeling should be adjustable/configurable. - The label should be visible in the QC results and ideally in the output reports. - Optionally, provide a summary or explanation for sequences that receive the label (e.g., why it was labeled recombinant). Let me know if you need further details or use case examples 😊
1 条评论