Read Logan Assembly data transparently
enhancement
Howdy devs,
My name is Artem Babaian, I'm working on a large-scale assmbly project called Logan (https://www.biorxiv.org/content/10.1101/2024.07.30.605881v2). In short, we've assembled 39 million datasets in the SRA and the assemblies are in fasta with the graph data stored in the headers, see: https://github.com/IndexThePlanet/Logan/blob/main/Contigs.md
I think it would be a really neat feature to have BandageNG read logan assembly files transparently as this would allow for millions of datasets to be "read" in BandageNG. Ideally one would be able to type in any SRA dataset accession and the data would be fetched (if available), the headers parsed, and the graph displayed in Bandage all in a single GUI command.
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