Problem with loading paths
Hello
I'm trying to view the paths generated by verkko v2.2.1 assembler but getting an error 'Path named ... not found':
<img src="https://github.com/user-attachments/assets/1e47521a-e339-492c-94ab-f11cf3425ae6" alt="Error message" width="700"/>
</p>
The paths file looks as below and was imported into BandageNG using `File` -> `Load paths`:
```
$head -n2 8-hicPipeline/scaff_rukki.paths.gaf
name path assignment
haplotype1_from_utig4-124 >utig4-92>utig4-122>utig4-124<utig4-404<utig4-173>utig4-172<utig4-87>utig4-86<utig4-88 HAPLOTYPE1
```
The latest BandageNG release v2025.5.1 was used.
Am I misinterpreting how it should work or is there a real problem?
Many thanks!
Kind regards
Ksenia
关闭于 2025-05-15 5 条评论