Copyright 2020-2021 Institute of Clinical Molecular Biology, Kiel, Germany

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and
associated documentation files (the "Software"), to deal in the Software without restriction,
including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense,
and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so,
subject to the following conditions:

The above copyright notice and this permission notice shall be included in all copies or substantial
portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

IPTK depends on third party libraries which are listed below

Biopython
  - URL:
  	https://biopython.org/
  - License:
	https://github.com/biopython/biopython/blob/master/LICENSE

Pandas
   - URL:
  	https://pandas.pydata.org/
   - License:
	https://github.com/pandas-dev/pandas/blob/master/LICENSE

Numpy
   - URL:
  	https://numpy.org/
   - License:
	https://numpy.org/doc/1.20/license.html

seaborn
   - URL:
  	https://seaborn.pydata.org/
   - License:
	https://github.com/mwaskom/seaborn/blob/master/LICENSE 

matplotlib
   - URL:
  	https://matplotlib.org/
   - License:
	https://matplotlib.org/stable/users/license.html

plotly
   - URL:
  	https://plotly.com/
   - License:
	https://github.com/plotly/plotly.py/blob/master/LICENSE.txt

mhcnames
   - URL:
  	https://github.com/openvax/mhcnames
   - License:
	https://github.com/openvax/mhcnames/blob/master/LICENSE

pyteomics
   - URL:
  	https://pyteomics.readthedocs.io/en/latest/
   - License:
	https://pyteomics.readthedocs.io/en/latest/ [Apache License version 2.0]

H5py
   - URL:
  	https://www.h5py.org/
   - License:
	https://docs.h5py.org/en/stable/licenses.html 

logomaker
   - URL:
  	https://logomaker.readthedocs.io/en/latest/
   -License:
	https://github.com/jbkinney/logomaker/blob/master/LICENSE

colour
   -URL:
	 https://github.com/vaab/colour
   -License:
	https://github.com/vaab/colour/blob/master/LICENSE

colour
   -URL:
	 https://lxml.de/
   -License:
	https://github.com/lxml/lxml/blob/master/LICENSES.txt

Nglview
   -URL:
	 https://github.com/nglviewer/nglview
   -License:
	https://github.com/nglviewer/nglview/blob/master/LICENSE

Sklearn
   -URL:
	 https://scikit-learn.org/stable/
   -License:
	https://github.com/scikit-learn/scikit-learn/blob/main/COPYING 

Pyopenms
   -URL:
	 https://pyopenms.readthedocs.io/en/latest/
   -License:
	1. https://pypi.org/project/pyopenms/2.1.0/#license
	2. https://github.com/OpenMS/OpenMS/blob/develop/License.txt

Bokeh 
   -URL:
	 https://docs.bokeh.org/en/latest/index.html
   - License:
	https://github.com/bokeh/bokeh/blob/branch-2.4/LICENSE.txt

HoloViews
   -URL: 
	https://holoviews.org
   - License:
	https://github.com/holoviz/holoviews/blob/master/LICENSE.txt
tqdm
   -URL:
	https://github.com/tqdm/tqdm
   -License:
	https://github.com/tqdm/tqdm/blob/master/LICENCE
numba
   -URL:
	http://numba.pydata.org
   -License:
	https://github.com/numba/numba/blob/master/LICENSE

goatools
   -URL:
	https://github.com/tanghaibao/goatools
   -License:
	https://github.com/tanghaibao/goatools/blob/main/LICENSE

