---
layout: post
title: "Closing issues on GitHub when building R packages with test driven development (CC303)"
blurb: "Putting it all together"
author: "PD Schloss"
date: 2024-09-23 9:00
comments: false
youtube: aRhzTIAPJeM
start_hash: 6790bba2b5043fe26b9e36bf178ff1432cdcc9d7
end_hash: a8c0036bd218e3451caab57198e594c7ad1ba332
---

Pat revisits two lingering issues / bugs in his R package using test driven development. The tasks in this episode are an integration of many concepts that have been developed over the course of this series of episodes. This episode is part of an ongoing effort to develop an R package that implements the naive Bayesian classifier for classifying 16S rRNA gene sequences.

<iframe style="margin: 0 auto;display:block;" width="560" height="315" src="https://www.youtube.com/embed/{{ page.youtube }}" frameborder="0" allow="accelerometer; autoplay; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>

## Code

You can browse the state of the repositories at the

* [beginning of the episode](https://github.com/riffomonas/phylotypr/tree/{{page.start_hash}})
* [end of the episode](https://github.com/riffomonas/phylotypr/tree/{{page.end_hash}})
