LOCUS       NC_004296_REF               1476 bp ss-RNA     linear   VRL 13-AUG-2018
DEFINITION  Lassa virus segment S, complete sequence.
ACCESSION   NC_004296_REF REGION: complement(1872..3347)
VERSION     NC_004296.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Mammarenavirus lassaense
  ORGANISM  Mammarenavirus lassaense
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae;
            Mammarenavirus.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Auperin,D.D. and McCormick,J.B.
  TITLE     Nucleotide sequence of the Lassa virus (Josiah strain) S genome RNA
            and amino acid sequence comparison of the N and GPC proteins to
            other arenaviruses
  JOURNAL   Virology 168 (2), 421-425 (1989)
   PUBMED   2916333
REFERENCE   2  (bases 1 to 1476)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2002) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from J04324.
            Draft entry and computer-readable sequence for [1] kindly provided
            by D.Auperin, 09-DEC-1988.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Mammarenavirus lassaense"
                     /mol_type="genomic RNA"
                     /strain="Josiah"
                     /db_xref="taxon:3052310"
                     /segment="S"
     gene            1..1476
                     /gene="GPC"
                     /db_xref="GeneID:956585"
     CDS             1..1476
                     /gene="GPC"
                     /codon_start=1
                     /product="glycoprotein"
                     /protein_id="NP_694870.1"
                     /db_xref="GeneID:956585"
                     /translation="MGQIVTFFQEVPHVIEEVMNIVLIALSVLAVLKGLYNFATCGLV
                     GLVTFLLLCGRSCTTSLYKGVYELQTLELNMETLNMTMPLSCTKNNSHHYIMVGNETG
                     LELTLTNTSIINHKFCNLSDAHKKNLYDHALMSIISTFHLSIPNFNQYEAMSCDFNGG
                     KISVQYNLSHSYAGDAANHCGTVANGVLQTFMRMAWGGSYIALDSGRGNWDCIMTSYQ
                     YLIIQNTTWEDHCQFSRPSPIGYLGLLSQRTRDIYISRRLLGTFTWTLSDSEGKDTPG
                     GYCLTRWMLIEAELKCFGNTAVAKCNEKHDEEFCDMLRLFDFNKQAIQRLKAEAQMSI
                     QLINKAVNALINDQLIMKNHLRDIMGIPYCNYSKYWYLNHTTTGRTSLPKCWLVSNGS
                     YLNETHFSDDIEQQADNMITEMLQKEYMERQGKTPLGLVDLFVFSTSFYLISIFLHLV
                     KIPTHRHIVGKSCPKPHRLNHMGICSCGLYKQPGVPVKWKR"
ORIGIN
        1 atgggacaaa tagtgacatt cttccaggaa gtgcctcatg taatagaaga ggtgatgaac
       61 attgttctca ttgcactgtc tgtactagca gtgctgaaag gtctgtacaa ttttgcaacg
      121 tgtggccttg ttggtttggt cactttcctc ctgttgtgtg gtaggtcttg cacaaccagt
      181 ctttataaag gggtttatga gcttcagact ctggaactaa acatggagac actcaatatg
      241 accatgcctc tctcctgcac aaagaacaac agtcatcatt atataatggt gggcaatgag
      301 acaggactag aactgacctt gaccaacacg agcattatta atcacaaatt ttgcaatctg
      361 tctgatgccc acaaaaagaa cctctatgac cacgctctta tgagcataat ctcaactttc
      421 cacttgtcca tccccaactt caatcagtat gaggcaatga gctgcgattt taatggggga
      481 aagattagtg tgcagtacaa cctgagtcac agctatgctg gggatgcagc caaccattgt
      541 ggtactgttg caaatggtgt gttacagact tttatgagga tggcttgggg tgggagctac
      601 attgctcttg actcaggccg tggcaactgg gactgtatta tgactagtta tcaatatctg
      661 ataatccaaa atacaacctg ggaagatcac tgccaattct cgagaccatc tcccatcggt
      721 tatctcgggc tcctctcaca aaggactaga gatatttata ttagtagaag attgctaggc
      781 acattcacat ggacactgtc agattctgaa ggtaaagaca caccaggggg atattgtctg
      841 accaggtgga tgctaattga ggctgaacta aaatgcttcg ggaacacagc tgtggcaaaa
      901 tgtaatgaga agcatgatga ggaattttgt gacatgctga ggctgtttga cttcaacaaa
      961 caagccattc aaaggttgaa agctgaagca caaatgagca ttcagttgat caacaaagca
     1021 gtaaatgctt tgataaatga ccaacttata atgaagaacc atctacggga catcatggga
     1081 attccatact gtaattacag caagtattgg tacctcaacc acacaactac tgggagaaca
     1141 tcactgccca aatgttggct tgtatcaaat ggttcatact tgaacgagac ccacttttct
     1201 gatgatattg aacaacaagc tgacaatatg atcactgaga tgttacagaa ggagtatatg
     1261 gagaggcagg ggaagacacc attgggtcta gttgacctct ttgtgttcag tacaagtttc
     1321 tatcttatta gcatcttcct tcacctagtc aaaataccaa ctcataggca tattgtaggc
     1381 aagtcgtgtc ccaaacctca cagattgaat catatgggca tttgttcctg tggactctac
     1441 aaacagcctg gtgtgcctgt gaaatggaag agatga
//
